| Thursday, 10 |
| 9:30 |
Special session: Challenges for Bioinformatics and Medical Informatics in future Healthcare
Chair: Fernando Martín Sánchez, ISCIII, Spain |
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» Casimir A. Kulikowski, Rutgers Univ., USA
» Martin Dugas, Univ. of Munich, Germany
» Angel Carracedo, Centro Nacional de Genotipado, Spain
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| 11:00 |
Coffe break |
| 11:30 |
Session 1: Medical databases and information systems
Chair: Victor Maojo, Univ. Politecnica de Madrid, Spain |
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The INFOBIOMED Network of Excellence: Developments for Facilitating Training and Mobility
» Guillermo de la Calle, Mario Benito, Juan Luis Moreno – Univ. Polit. de Madrid, Spain
» Eva Molero – Biomedical Informatics Research Group, Spain
Data Management and Visualization issues in a Fully Digital Echocardiography Laboratory
» Carlos Costa, José Luis Oliveira, Augusto Silva – Univ. of Aveiro, Portugal
» Vasco Ribeiro, José Ribeiro – Centro Hospitalar V. N. Gaia, Portugal
A Framework Based on Web Services and Grid Technologies for Medical Image Registration
» Ignacio Blanquer, Vicente Hernández, Ferran Mas, Damià Segrelles – Univ. Politécnica de Valencia, Spain
Service Oriented Architecture for Biomedical Collaborative Research
» José A. Alvaro, Antonio Estruch, Oscar Coltell – Univ. Jaume I, Spain
» David Pérez del Rey, Guillermo de la Calle – Univ. Politécnica de Madrid, Spain
» Juan Pedro Sanchez – Instituto de Salud Carlos III, Spain
» Ferran Sanz – GRIB, IMIM/UPF Barcelona, Spain |
| 13:00 |
Lunch |
| 14:30 |
Session 2: Data analysis and knowledge discovery
Chair: José Luis Oliveira, Univ. Aveiro, Portugal |
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Dynamics of Vertebral Column Observed by Stereovision and Recurrent Neural Network Model
» Fernando Gonzalez, Vicente Lopez – Univ. de Valencia, Spain
» Stanislaw Jankowski, Jacek Dusza – Warsaw Univ. of Technology, Poland
» Javier Clemente – Hospital Univ. La Fe, Spain
Endocardial tracking in contrast echocardiography using optical flow
» Norberto Malpica, Juan Garamendi, Emanuele Schiavi – Univ. Rey Juan Carlos, Spain
» Manuel Desco – H.G. Univ. Gregorio Marañón de Madrid, Spain
Integration of genetic and medical information through a web crawler system
» Gaspar Dias, José Luis Oliveira – Univ. of Aveiro, Portugal
» Javier Vicente, Fernando Martin-Sanchez – Instituto de Salud Carlos III, Spain
A Grid Infrastructure for Text Mining of Full Text Articles and Creation of a Knowledge Base of Gene Relations
» Jeyakumar Natarajan, Catherine Hack, Werner Dubitzky – Univ. of Ulster, UK
» Niranjan Mulay – United Devices Inc, Austin, USA
» Catherine DeSesa, Eric Bremer – Northwestern Univ., Chicago, USA
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| 16:00 |
Coffee Break |
| 16:30 |
Session 3:
Data analysis in Bioinformatics
Chair: Manuel Santos, Univ. Aveiro, Portugal |
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Extracting Molecular Diversity between Populations through Sequence Alignments
» Steinar Thorvaldsen, Tor Flå, Nils Willassen – Univ. of Tromsø, Norway
Detection of Hydrophobic Clusters in Molecular Dynamics Protein Unfolding: Simulations Using Association Rules
» Paulo Azevedo – Univ. of Minho, Portugal
» Cândida Silva, J. Rodrigues, Nuno Ferreira, Rui Brito – Univ. of Coimbra, Portugal
Protein Secondary Structure Classifiers Fusion using OWA
» Majid Kazemian, Behzad Moshiri, Hamid Nikbakht, Caro Lucas – Univ. of Tehran, Iran
Relevance, Redundancy and Differential Prioritization in Feature Selection for Multiclass Gene Expression Data
» Chia Huey Ooi, Madhu Chetty, Shyh Wei Teng – Monash Univ., Australia
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| 18:00 |
Posters session |
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Biomedical Image Processing Integration through INBIOMED: A Web Services–Based Platform
» David Pérez del Rey, José Crespo, Alberto Anguita – Univ. Politécnica de Madrid, Spain
» Juan Pérez Ordóñez, Julian Dorado – Univ. Coruña, Spain
» Gloria Bueno, Vicente Feliú – Univ. Castilla-La Mancha, Spain
» Antonio Estruch, José Heredia – Univ. Jaume I, Spain
The Ontological Lens: Zooming in and out from Genomic to Clinical Level
» Domenico Pisanelli, Francesco Pinciroli, Marco Masseroli – Politecnico di Milano, Italy
Unfolding of Virtual Endoscopy Using Ray-Template
» Hye-Jin Lee, Sukhyun Lim, Byeong-Seok Shin – Inha Univ., Rep. of Korea
Prediction of the Performance of Human Liver Cell Bioreactors by Donor Organ Data
» Wolfgang Schmidt-Heck, Reinhard Guthke – Hans Knoell Institute, Germany
» Katrin Zeilinger, Gesine Pless, Joerg Gerlach – Univ. Medicine Berlin, Germany
» Michael Pfaff, BioControl Jena GmbH, Germany
A Bioinformatic Approach to Epigenetic Susceptibility in Non-Disjunctional Diseases
» Ismael Ejarque, Guillermo López-Campos, Javier Vicente, Fernando Martin-Sanchez – Institute of Health Carlos III, Spain
» Michel Herranz – Spanish National Cancer Centre, Spain
Foreseeing Promising Bio-Medical Findings for Effective Applications of Data Mining
» Stefano Bonacina, Marco Masseroli, Francesco Pinciroli – Politecnico of Milan, Italy
Simultaneous Scheduling of Replication and Computation for Bioinformatic Applications on the Grid
» Frédéric Desprez, Antoine Vernois – CNRS–INRIA, France
» Christophe Blanchet – LBRS Laboratory / IBCP Institute, France
Application of Three-Level Handprinted Documents Recognition in Medical Information Systems
» Jerzy Sas, Marek Kurzynski – Wroclaw Univ. of Technology,Poland
Focal Activity in Simulated LQT2 Models at Rapid Ventricular Pacing: Analysis of Cardiac Electrical Activity Using Grid–Based Computation
» Chong Wang, Antje Krause – Univ. of Applied Sciences Wildau, Germany
» Chris Nugent, Werner Dubitzky – Univ. of Ulster, UK
Efficient Computation of Fitness Function by Pruning in Hydrophobic-Hydrophilic Model
» Md Hoque, Madhu Chetty, Laurence Dooley – Monash Univ., Australia
Evaluation of fuzzy measures in profile hidden Markov models for protein sequences
» Niranjan Bidargaddi, Madhu Chetty, Joarder Kamruzzaman – Monash Univ., Australia
Gene Selection and Classification of Human Lymphoma from Microarray Data
» Joarder Kamruzzaman, Suryani Lim, Iqbal Gondal – Monash Univ., Australia
» Rezaul Begg – Victoria University, Australia
Microarray data analysis and management in colorectal cancer
» Oscar García-Hernández, Guillermo López-Campos, Juan Pedro Sanchez, Rosa Blanco, Fernando Martín-Sánchez – Institute of Health Carlos III, Spain
» Alejandro Romera-López, Beatriz Pérez-Villamil – Hospital Clínico San Carlos, Spain
Boosted Decision Trees for Diagnosis Type of Hypertension
» Michal Wozniak – Wroclaw Univ. of Technology, Poland
|
| 20:00 |
Conference Dinner |
| |
|
| Friday, 11 |
| 9:00 |
Session 4: Statistical methods and tools for biomedical data analysis
Chair: Reinhard Guthke, Hans-Knoell Institut, Germany |
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Hybridizing Sparse Component Analysis with Genetic Algorithms for Blind Source Separation
» Kurt Stadlthanner, Fabian Theis, Elmar Lang – Univ. of Regensburg, Germany
» Carlos Puntonet, Juan Gorriz – Univ. Granada, Spain
» Ana Tomé – Univ. of Aveiro, Portugal
Hardware Approach for the Artificial Hand Control Algorithm Realization
» Andrzej Wolczowski, Przemyslaw Szecowka, Mateusz Kowalski, Krzysztof Krysztoforski – Wroclaw Univ. of Technology, Poland
Improving the Therapeutic Performance of a Medical Bayesian Network using Noisy Threshold Models
» Stefan Visscher, Marc Bonten, Karin Schurink – Univ. Medical Center Utrecht, Netherlands
» Peter Lucas – Institute for Computing and Information Sciences, Netherlands
SVM Detection of Premature Ectopic Excitations based on modified PCA
» Stanislaw Jankowski, Jacek Dusza – Warsaw Univ. of Technology, Poland
» Mariusz Wierzbowski – Military Academy of Technology, Poland
» Artur Oreziak – Medical Univ. of Warsaw, Poland
A Text Corpora-Based Estimation of the Familiarity of Health Terminology
» Qing Zeng, Eunjung Kim, Jon Crowell – Harvard Medical School, USA
» Tony Tse – National Library of Medicine, USA
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| 11:00 |
Coffee Break |
| 11:30 |
Session 5: Computational models in Bioinformatics
Chair: George Potamias, ICS - FORTH, Greece |
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Vertical Integration of Bioinformatics Tools and Information Processing on Analysis Outcome
» Andigoni Malousi, Vassilis Koutkias, Ioanna Chouvarda, Nicos Maglaveras – Aristotle Univ., Greece
Tumor Classification from Gene Expression Data: a Coding-Based Multiclass Learning Approach
» Alexander Huntemann – Katholieke Universiteit Leuven, Belgium
» José Gonzalez – Univ. Politécnica de Madrid, Spain
» Elizabeth Tapia – Escuela de Ingeniería Electrónica, Argentina
Using Treemaps to Visualize Phylogenetic Trees
» Adam Arvelakis, Martin Reczko, Alexandros Stamatakis, Alkiviadis Symeonidis, » Ioannis Tollis – FORTH/ICS, Univ. of Crete, Greece
An ontologic approach to represent molecular structure information
» Eva Armengol, Enric Plaza – Artificial Intelligence Research Institute, Spain
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| 13:00 |
Lunch |
| 14:30 |
Session 6: Decision support systems
Chair: Rudiger Brause, J.W. Goethe Univ., German |
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On Sample Size and Classification Accuracy: A Performance Comparison
» Margarita Sordo, Qing Zeng – Harvard Medical School, Boston, USA
Influenza Forecast: Comparison of Case-Based Reasoning and Statistical Methods
» Tina Waligora, Rainer Schmidt – Univ. Rostock, Germany
Markov Chains Pattern Recognition Approach Applied to the Medical Diagnosis Tasks
» Michal Wozniak – Wroclaw Univ. of Technology, Poland
Computer-Aided Sequential Diagnosis Using Fuzzy Relations - Comparative Analysis of Methods
» Marek Kurzynski, Andrzej Zolnierek – Wroclaw Univ. of Technology, Poland
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| 16:00 |
Closing Ceremony |
